WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C1.5a.1 Sequence Name  F54C1.5a.1
Length (nt)  2219   Chromosome Location  I: 4989548-4994675
Chromosome . Primary Identifier  I Chromosome Location . Start  4989548
Chromosome Location . End  4994675 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C1.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001117 dyf-1 F54C1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C1.5a F54C1.5a 1971   I: 4989700-4990020

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54C1.5a.1 4989548 4994675 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11227   473   I: 4989548-4990020 Caenorhabditis elegans
Exon11232   195   I: 4990079-4990273 Caenorhabditis elegans
Exon11237   136   I: 4990318-4990453 Caenorhabditis elegans
Exon11242   290   I: 4990756-4991045 Caenorhabditis elegans
Exon11247   189   I: 4991089-4991277 Caenorhabditis elegans
Exon11252   80   I: 4991574-4991653 Caenorhabditis elegans
Exon11257   129   I: 4991700-4991828 Caenorhabditis elegans
Exon11262   109   I: 4991875-4991983 Caenorhabditis elegans
Exon11267   63   I: 4992538-4992600 Caenorhabditis elegans
Exon11272   153   I: 4992649-4992801 Caenorhabditis elegans
Exon11277   183   I: 4993324-4993506 Caenorhabditis elegans
Exon11282   66   I: 4994231-4994296 Caenorhabditis elegans
Exon11285   153   I: 4994523-4994675 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54C1.5a.1 4989548 4994675 -1

1 Sequence

Length
2219

1 Sequence Ontology Term

Identifier Name Description
transcript