WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44E4.1d.1 Sequence Name  C44E4.1d.1
Length (nt)  12782   Chromosome Location  I: 4610143-4633347
Chromosome . Primary Identifier  I Chromosome Location . Start  4610143
Chromosome Location . End  4633347 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44E4.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016650 ubr-4 C44E4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44E4.1d C44E4.1d 12657   I: 4610268-4610456

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C44E4.1d.1 4610143 4633347 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10358   314   I: 4610143-4610456 Caenorhabditis elegans
Exon10362   307   I: 4610507-4610813 Caenorhabditis elegans
Exon10365   443   I: 4611271-4611713 Caenorhabditis elegans
Exon10367   991   I: 4612026-4613016 Caenorhabditis elegans
Exon10371   395   I: 4613279-4613673 Caenorhabditis elegans
Exon10374   135   I: 4613896-4614030 Caenorhabditis elegans
Exon10377   680   I: 4614072-4614751 Caenorhabditis elegans
Exon10380   476   I: 4614802-4615277 Caenorhabditis elegans
Exon10383   305   I: 4615837-4616141 Caenorhabditis elegans
Exon10386   1197   I: 4616803-4617999 Caenorhabditis elegans
Exon10389   407   I: 4618529-4618935 Caenorhabditis elegans
Exon10392   1571   I: 4619675-4621245 Caenorhabditis elegans
Exon10395   907   I: 4621867-4622773 Caenorhabditis elegans
Exon10398   963   I: 4623531-4624493 Caenorhabditis elegans
Exon10400   268   I: 4625612-4625879 Caenorhabditis elegans
Exon10402   736   I: 4626465-4627200 Caenorhabditis elegans
Exon10406   1445   I: 4628068-4629512 Caenorhabditis elegans
Exon10408   102   I: 4629946-4630047 Caenorhabditis elegans
Exon10411   89   I: 4630093-4630181 Caenorhabditis elegans
Exon10412   57   I: 4631247-4631303 Caenorhabditis elegans
Exon10415   359   I: 4631501-4631859 Caenorhabditis elegans
Exon10417   517   I: 4632596-4633112 Caenorhabditis elegans
Exon10420   118   I: 4633230-4633347 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C44E4.1d.1 4610143 4633347 -1

1 Sequence

Length
12782

1 Sequence Ontology Term

Identifier Name Description
transcript