WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1007.2.1 Sequence Name  D1007.2.1
Length (nt)  1045   Chromosome Location  I: 4571192-4575038
Chromosome . Primary Identifier  I Chromosome Location . Start  4571192
Chromosome Location . End  4575038 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1007.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000629 col-52 D1007.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1007.2 D1007.2 783   I: 4571214-4571309

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D1007.2.1 4571192 4575038 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10274   118   I: 4571192-4571309 Caenorhabditis elegans
Exon10276   80   I: 4571701-4571780 Caenorhabditis elegans
Exon10278   420   I: 4571933-4572352 Caenorhabditis elegans
Exon10280   162   I: 4572427-4572588 Caenorhabditis elegans
Exon10282   142   I: 4572639-4572780 Caenorhabditis elegans
Exon10284   123   I: 4574916-4575038 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D1007.2.1 4571192 4575038 -1

1 Sequence

Length
1045

1 Sequence Ontology Term

Identifier Name Description
transcript