WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01A4.1d.1 Sequence Name  T01A4.1d.1
Length (nt)  4490   Chromosome Location  I: 4481198-4508940
Chromosome . Primary Identifier  I Chromosome Location . Start  4481198
Chromosome Location . End  4508940 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01A4.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020131 gcy-28 T01A4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01A4.1d T01A4.1d 3717   I: 4481238-4481348

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T01A4.1d.1 4481198 4508940 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9982   151   I: 4481198-4481348 Caenorhabditis elegans
Exon9983   143   I: 4481434-4481576 Caenorhabditis elegans
Exon9984   268   I: 4482154-4482421 Caenorhabditis elegans
Exon9985   144   I: 4483442-4483585 Caenorhabditis elegans
Exon9986   121   I: 4484299-4484419 Caenorhabditis elegans
Exon9994   115   I: 4498008-4498122 Caenorhabditis elegans
Exon9997   202   I: 4499008-4499209 Caenorhabditis elegans
Exon10000   228   I: 4499693-4499920 Caenorhabditis elegans
Exon10003   120   I: 4500472-4500591 Caenorhabditis elegans
Exon10005   276   I: 4500647-4500922 Caenorhabditis elegans
Exon10010   330   I: 4502570-4502899 Caenorhabditis elegans
Exon10015   200   I: 4503270-4503469 Caenorhabditis elegans
Exon10019   145   I: 4504425-4504569 Caenorhabditis elegans
Exon10023   172   I: 4504638-4504809 Caenorhabditis elegans
Exon10027   156   I: 4505062-4505217 Caenorhabditis elegans
Exon10031   317   I: 4505722-4506038 Caenorhabditis elegans
Exon10035   238   I: 4506668-4506905 Caenorhabditis elegans
Exon10039   159   I: 4507152-4507310 Caenorhabditis elegans
Exon10042   99   I: 4507484-4507582 Caenorhabditis elegans
Exon10046   906   I: 4508035-4508940 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T01A4.1d.1 4481198 4508940 1

1 Sequence

Length
4490

1 Sequence Ontology Term

Identifier Name Description
transcript