WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D9A.2a.1 Sequence Name  Y47D9A.2a.1
Length (nt)  1770   Chromosome Location  I: 4298184-4302245
Chromosome . Primary Identifier  I Chromosome Location . Start  4298184
Chromosome Location . End  4302245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D9A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021629 scpl-3 Y47D9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D9A.2a Y47D9A.2a 864   I: 4298626-4298726

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D9A.2a.1 4298184 4302245 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9553   543   I: 4298184-4298726 Caenorhabditis elegans
Exon9554   112   I: 4299900-4300011 Caenorhabditis elegans
Exon9556   453   I: 4300630-4301082 Caenorhabditis elegans
Exon9559   662   I: 4301584-4302245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D9A.2a.1 4298184 4302245 1

1 Sequence

Length
1770

1 Sequence Ontology Term

Identifier Name Description
transcript