WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D9A.5.2 Sequence Name  Y47D9A.5.2
Length (nt)  1366   Chromosome Location  I: 4277891-4279622
Chromosome . Primary Identifier  I Chromosome Location . Start  4277891
Chromosome Location . End  4279622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D9A.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021632 Y47D9A.5 Y47D9A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D9A.5 Y47D9A.5 1278   I: 4277933-4277982

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D9A.5.2 4277891 4279622 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9536   92   I: 4277891-4277982 Caenorhabditis elegans
Exon9539   228   I: 4278027-4278254 Caenorhabditis elegans
Exon9541   239   I: 4278297-4278535 Caenorhabditis elegans
Exon9543   77   I: 4278587-4278663 Caenorhabditis elegans
Exon9545   236   I: 4278713-4278948 Caenorhabditis elegans
Exon9547   358   I: 4278995-4279352 Caenorhabditis elegans
Exon9549   136   I: 4279487-4279622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D9A.5.2 4277891 4279622 -1

1 Sequence

Length
1366

1 Sequence Ontology Term

Identifier Name Description
transcript