WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D9A.5.1 Sequence Name  Y47D9A.5.1
Length (nt)  1371   Chromosome Location  I: 4277830-4279622
Chromosome . Primary Identifier  I Chromosome Location . Start  4277830
Chromosome Location . End  4279622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D9A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021632 Y47D9A.5 Y47D9A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D9A.5 Y47D9A.5 1278   I: 4277933-4277982

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D9A.5.1 4277830 4279622 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9535   9   I: 4277830-4277838 Caenorhabditis elegans
Exon9537   88   I: 4277895-4277982 Caenorhabditis elegans
Exon9538   228   I: 4278027-4278254 Caenorhabditis elegans
Exon9540   239   I: 4278297-4278535 Caenorhabditis elegans
Exon9542   77   I: 4278587-4278663 Caenorhabditis elegans
Exon9544   236   I: 4278713-4278948 Caenorhabditis elegans
Exon9546   358   I: 4278995-4279352 Caenorhabditis elegans
Exon9548   136   I: 4279487-4279622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D9A.5.1 4277830 4279622 -1

1 Sequence

Length
1371

1 Sequence Ontology Term

Identifier Name Description
transcript