WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12E2.3.1 Sequence Name  R12E2.3.1
Length (nt)  1234   Chromosome Location  I: 4175319-4177271
Chromosome . Primary Identifier  I Chromosome Location . Start  4175319
Chromosome Location . End  4177271 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12E2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004464 rpn-8 R12E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12E2.3 R12E2.3 1089   I: 4175323-4175442

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R12E2.3.1 4175319 4177271 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9138   124   I: 4175319-4175442 Caenorhabditis elegans
Exon9140   145   I: 4175496-4175640 Caenorhabditis elegans
Exon9141   86   I: 4175685-4175770 Caenorhabditis elegans
Exon9142   57   I: 4175831-4175887 Caenorhabditis elegans
Exon9144   129   I: 4176355-4176483 Caenorhabditis elegans
Exon9145   399   I: 4176533-4176931 Caenorhabditis elegans
Exon9146   294   I: 4176978-4177271 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R12E2.3.1 4175319 4177271 1

1 Sequence

Length
1234

1 Sequence Ontology Term

Identifier Name Description
transcript