WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:E01A2.2b Sequence Name  E01A2.2b
Length (nt)  1590   Chromosome Location  I: 4133315-4133327
Chromosome . Primary Identifier  I Chromosome Location . Start  4133315
Chromosome Location . End  4133327
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01A2.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33369 SRRT-1, isoform b 59.1 529 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00083662
WBRNAi00030447
WBRNAi00062508
WBRNAi00024973
WBRNAi00024974
WBRNAi00043556
WBRNAi00024975
WBRNAi00003307
WBRNAi00083848
WBRNAi00080234

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:E01A2.2b 4133315 4133327 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017085 srrt-1 E01A2.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier 		Start End Strand
CDS:E01A2.2b 4133315 4133327 1
CDS:E01A2.2b 4133383 4134490 1
CDS:E01A2.2b 4134547 4134857 1
CDS:E01A2.2b 4134905 4135062 1

1 Sequence

Length
1590

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:E01A2.2b.2 E01A2.2b.2 2620   I: 4132362-4135239
Transcript:E01A2.2b.3 E01A2.2b.3 2364   I: 4132498-4135239
Transcript:E01A2.2b.4 E01A2.2b.4 2455   I: 4132627-4135239
Transcript:E01A2.2b.1 E01A2.2b.1 1924   I: 4133158-4135239