WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023142 Gene Name  T20F5.1
Sequence Name  ? T20F5.1 Organism  Caenorhabditis elegans
Automated Description  Is affected by sir-2.1 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 328
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00023142

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T20F5.1 T20F5.1 328   I: 3916064-3916391
 

Other

0 CDSs

1 RNAi Result

WormBase ID
WBRNAi00004235

8 Allele

Public Name
gk962706
gk963902
gk964159
WBVar02039485
WBVar01281181
WBVar01801296
WBVar01801295
WBVar01801297

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00023142 3916064 3916391 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_3916392..3917796   1405 I: 3916392-3917796 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes found to be regulated by low-copy overexpression of sir-2.1 with p < 0.014. N.A. WBPaper00026929:sir-2.1_overexpression_regulated
  Genome-wide analysis of developmental and sex-regulated gene expression profile. self-organizing map cgc4489_group_17

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00023142 3916064 3916391 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
328

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_3915309..3916063   755 I: 3915309-3916063 Caenorhabditis elegans