WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50F2.3.1 Sequence Name  C50F2.3.1
Length (nt)  2630   Chromosome Location  I: 3877063-3880743
Chromosome . Primary Identifier  I Chromosome Location . Start  3877063
Chromosome Location . End  3880743 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016837 syf-1 C50F2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50F2.3 C50F2.3 2568   I: 3877066-3877131

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50F2.3.1 3877063 3880743 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7982   69   I: 3877063-3877131 Caenorhabditis elegans
Exon7983   120   I: 3877179-3877298 Caenorhabditis elegans
Exon7984   657   I: 3877344-3878000 Caenorhabditis elegans
Exon7985   173   I: 3878048-3878220 Caenorhabditis elegans
Exon7986   776   I: 3878609-3879384 Caenorhabditis elegans
Exon7987   110   I: 3879439-3879548 Caenorhabditis elegans
Exon7988   725   I: 3880019-3880743 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50F2.3.1 3877063 3880743 1

1 Sequence

Length
2630

1 Sequence Ontology Term

Identifier Name Description
transcript