WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12F5.5b.4 Sequence Name  T12F5.5b.4
Length (nt)  3001   Chromosome Location  I: 3732906-3738760
Chromosome . Primary Identifier  I Chromosome Location . Start  3732906
Chromosome Location . End  3738760 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12F5.5b.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004147 larp-5 T12F5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12F5.5b T12F5.5b 2091   I: 3733598-3733703

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T12F5.5b.4 3732906 3738760 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7597   798   I: 3732906-3733703 Caenorhabditis elegans
Exon7604   134   I: 3734433-3734566 Caenorhabditis elegans
Exon7610   1293   I: 3734627-3735919 Caenorhabditis elegans
Exon7616   159   I: 3736187-3736345 Caenorhabditis elegans
Exon7622   101   I: 3736396-3736496 Caenorhabditis elegans
Exon7628   137   I: 3736557-3736693 Caenorhabditis elegans
Exon7634   189   I: 3737290-3737478 Caenorhabditis elegans
Exon7638   190   I: 3738571-3738760 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T12F5.5b.4 3732906 3738760 -1

1 Sequence

Length
3001

1 Sequence Ontology Term

Identifier Name Description
transcript