WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F2.5.1 Sequence Name  T28F2.5.1
Length (nt)  2089   Chromosome Location  I: 3641651-3647082
Chromosome . Primary Identifier  I Chromosome Location . Start  3641651
Chromosome Location . End  3647082 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000368 ccb-1 T28F2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F2.5 T28F2.5 1581   I: 3641958-3642293

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T28F2.5.1 3641651 3647082 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7457   643   I: 3641651-3642293 Caenorhabditis elegans
Exon7458   279   I: 3642859-3643137 Caenorhabditis elegans
Exon7459   268   I: 3643189-3643456 Caenorhabditis elegans
Exon7460   232   I: 3643750-3643981 Caenorhabditis elegans
Exon7461   89   I: 3644908-3644996 Caenorhabditis elegans
Exon7462   119   I: 3645050-3645168 Caenorhabditis elegans
Exon7463   123   I: 3645461-3645583 Caenorhabditis elegans
Exon7464   117   I: 3646133-3646249 Caenorhabditis elegans
Exon7465   219   I: 3646864-3647082 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T28F2.5.1 3641651 3647082 -1

1 Sequence

Length
2089

1 Sequence Ontology Term

Identifier Name Description
transcript