WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.23c.1 Sequence Name  Y47G6A.23c.1
Length (nt)  12292   Chromosome Location  I: 3565014-3600677
Chromosome . Primary Identifier  I Chromosome Location . Start  3565014
Chromosome Location . End  3600677 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.23c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003060 lpd-3 Y47G6A.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.23c Y47G6A.23c 12063   I: 3565243-3565380

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.23c.1 3565014 3600677 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7228   367   I: 3565014-3565380 Caenorhabditis elegans
Exon7232   138   I: 3567297-3567434 Caenorhabditis elegans
Exon7237   453   I: 3568220-3568672 Caenorhabditis elegans
Exon7241   660   I: 3569724-3570383 Caenorhabditis elegans
Exon7245   123   I: 3571156-3571278 Caenorhabditis elegans
Exon7249   693   I: 3571942-3572634 Caenorhabditis elegans
Exon7253   383   I: 3573354-3573736 Caenorhabditis elegans
Exon7257   685   I: 3574537-3575221 Caenorhabditis elegans
Exon7261   1513   I: 3576154-3577666 Caenorhabditis elegans
Exon7265   822   I: 3578714-3579535 Caenorhabditis elegans
Exon7269   96   I: 3580196-3580291 Caenorhabditis elegans
Exon7273   425   I: 3580341-3580765 Caenorhabditis elegans
Exon7277   660   I: 3581847-3582506 Caenorhabditis elegans
Exon7281   112   I: 3583430-3583541 Caenorhabditis elegans
Exon7285   1267   I: 3583595-3584861 Caenorhabditis elegans
Exon7289   313   I: 3585185-3585497 Caenorhabditis elegans
Exon7293   570   I: 3586719-3587288 Caenorhabditis elegans
Exon7297   183   I: 3588103-3588285 Caenorhabditis elegans
Exon7301   252   I: 3589434-3589685 Caenorhabditis elegans
Exon7305   118   I: 3590291-3590408 Caenorhabditis elegans
Exon7309   356   I: 3591006-3591361 Caenorhabditis elegans
Exon7313   120   I: 3592122-3592241 Caenorhabditis elegans
Exon7317   262   I: 3592419-3592680 Caenorhabditis elegans
Exon7321   188   I: 3593645-3593832 Caenorhabditis elegans
Exon7325   339   I: 3594612-3594950 Caenorhabditis elegans
Exon7329   323   I: 3595976-3596298 Caenorhabditis elegans
Exon7333   207   I: 3597300-3597506 Caenorhabditis elegans
Exon7337   137   I: 3598620-3598756 Caenorhabditis elegans
Exon7342   165   I: 3598810-3598974 Caenorhabditis elegans
Exon7346   192   I: 3599765-3599956 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.23c.1 3565014 3600677 -1

1 Sequence

Length
12292

1 Sequence Ontology Term

Identifier Name Description
transcript