WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.20c.1 Sequence Name  Y47G6A.20c.1
Length (nt)  1041   Chromosome Location  I: 3543557-3546894
Chromosome . Primary Identifier  I Chromosome Location . Start  3543557
Chromosome Location . End  3546894 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.20c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004389 rnp-6 Y47G6A.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.20c Y47G6A.20c 1041   I: 3543557-3543726

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.20c.1 3543557 3546894 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7174   170   I: 3543557-3543726 Caenorhabditis elegans
Exon7176   34   I: 3543775-3543808 Caenorhabditis elegans
Exon7179   214   I: 3544403-3544616 Caenorhabditis elegans
Exon7182   203   I: 3545775-3545977 Caenorhabditis elegans
Exon7185   159   I: 3546364-3546522 Caenorhabditis elegans
Exon7188   165   I: 3546577-3546741 Caenorhabditis elegans
Exon7189   96   I: 3546799-3546894 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.20c.1 3543557 3546894 -1

1 Sequence

Length
1041

1 Sequence Ontology Term

Identifier Name Description
transcript