WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.20b.1 Sequence Name  Y47G6A.20b.1
Length (nt)  2360   Chromosome Location  I: 3539553-3546910
Chromosome . Primary Identifier  I Chromosome Location . Start  3539553
Chromosome Location . End  3546910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.20b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004389 rnp-6 Y47G6A.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.20b Y47G6A.20b 2250   I: 3539647-3540102

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.20b.1 3539553 3546910 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7170   550   I: 3539553-3540102 Caenorhabditis elegans
Exon7171   678   I: 3541335-3542012 Caenorhabditis elegans
Exon7172   135   I: 3542982-3543116 Caenorhabditis elegans
Exon7175   144   I: 3543583-3543726 Caenorhabditis elegans
Exon7178   214   I: 3544403-3544616 Caenorhabditis elegans
Exon7181   203   I: 3545775-3545977 Caenorhabditis elegans
Exon7184   159   I: 3546364-3546522 Caenorhabditis elegans
Exon7187   165   I: 3546577-3546741 Caenorhabditis elegans
Exon7191   112   I: 3546799-3546910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.20b.1 3539553 3546910 -1

1 Sequence

Length
2360

1 Sequence Ontology Term

Identifier Name Description
transcript