WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.6.1 Sequence Name  Y47G6A.6.1
Length (nt)  2574   Chromosome Location  I: 3516450-3523418
Chromosome . Primary Identifier  I Chromosome Location . Start  3516450
Chromosome Location . End  3523418 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021636 pcaf-1 Y47G6A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.6 Y47G6A.6 2304   I: 3516552-3516668

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.6.1 3516450 3523418 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7080   219   I: 3516450-3516668 Caenorhabditis elegans
Exon7081   121   I: 3516725-3516845 Caenorhabditis elegans
Exon7082   128   I: 3516900-3517027 Caenorhabditis elegans
Exon7083   155   I: 3517805-3517959 Caenorhabditis elegans
Exon7084   92   I: 3518023-3518114 Caenorhabditis elegans
Exon7085   101   I: 3518165-3518265 Caenorhabditis elegans
Exon7086   905   I: 3519259-3520163 Caenorhabditis elegans
Exon7087   105   I: 3521303-3521407 Caenorhabditis elegans
Exon7088   128   I: 3521457-3521584 Caenorhabditis elegans
Exon7089   269   I: 3522308-3522576 Caenorhabditis elegans
Exon7090   351   I: 3523068-3523418 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.6.1 3516450 3523418 1

1 Sequence

Length
2574

1 Sequence Ontology Term

Identifier Name Description
transcript