WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.17.1 Sequence Name  Y47G6A.17.1
Length (nt)  5268   Chromosome Location  I: 3487804-3499706
Chromosome . Primary Identifier  I Chromosome Location . Start  3487804
Chromosome Location . End  3499706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021643 ccep-290 Y47G6A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.17 Y47G6A.17 5211   I: 3487861-3487908

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.17.1 3487804 3499706 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7023   105   I: 3487804-3487908 Caenorhabditis elegans
Exon7024   180   I: 3487959-3488138 Caenorhabditis elegans
Exon7025   486   I: 3488185-3488670 Caenorhabditis elegans
Exon7026   90   I: 3488840-3488929 Caenorhabditis elegans
Exon7027   128   I: 3488976-3489103 Caenorhabditis elegans
Exon7028   73   I: 3489151-3489223 Caenorhabditis elegans
Exon7029   112   I: 3489269-3489380 Caenorhabditis elegans
Exon7030   236   I: 3489771-3490006 Caenorhabditis elegans
Exon7031   318   I: 3490061-3490378 Caenorhabditis elegans
Exon7032   194   I: 3490856-3491049 Caenorhabditis elegans
Exon7033   139   I: 3492759-3492897 Caenorhabditis elegans
Exon7034   244   I: 3493446-3493689 Caenorhabditis elegans
Exon7035   179   I: 3493738-3493916 Caenorhabditis elegans
Exon7036   315   I: 3494387-3494701 Caenorhabditis elegans
Exon7037   352   I: 3494819-3495170 Caenorhabditis elegans
Exon7038   290   I: 3495513-3495802 Caenorhabditis elegans
Exon7039   304   I: 3496042-3496345 Caenorhabditis elegans
Exon7040   119   I: 3496396-3496514 Caenorhabditis elegans
Exon7041   661   I: 3497070-3497730 Caenorhabditis elegans
Exon7042   98   I: 3497777-3497874 Caenorhabditis elegans
Exon7043   138   I: 3498225-3498362 Caenorhabditis elegans
Exon7044   402   I: 3498518-3498919 Caenorhabditis elegans
Exon7045   105   I: 3499602-3499706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.17.1 3487804 3499706 -1

1 Sequence

Length
5268

1 Sequence Ontology Term

Identifier Name Description
transcript