WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.11.1 Sequence Name  Y47G6A.11.1
Length (nt)  3664   Chromosome Location  I: 3449326-3462174
Chromosome . Primary Identifier  I Chromosome Location . Start  3449326
Chromosome Location . End  3462174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003422 msh-6 Y47G6A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.11 Y47G6A.11 3561   I: 3449327-3449462

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.11.1 3449326 3462174 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6966   137   I: 3449326-3449462 Caenorhabditis elegans
Exon6967   281   I: 3450523-3450803 Caenorhabditis elegans
Exon6968   765   I: 3452033-3452797 Caenorhabditis elegans
Exon6969   806   I: 3455000-3455805 Caenorhabditis elegans
Exon6970   412   I: 3457107-3457518 Caenorhabditis elegans
Exon6971   552   I: 3458517-3459068 Caenorhabditis elegans
Exon6972   333   I: 3460495-3460827 Caenorhabditis elegans
Exon6973   378   I: 3461797-3462174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.11.1 3449326 3462174 1

1 Sequence

Length
3664

1 Sequence Ontology Term

Identifier Name Description
transcript