WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.28.1 Sequence Name  Y47G6A.28.1
Length (nt)  2127   Chromosome Location  I: 3439099-3449175
Chromosome . Primary Identifier  I Chromosome Location . Start  3439099
Chromosome Location . End  3449175 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.28.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006440 nefr-1 Y47G6A.28 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.28 Y47G6A.28 1926   I: 3439108-3439179

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.28.1 3439099 3449175 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6950   81   I: 3439099-3439179 Caenorhabditis elegans
Exon6951   106   I: 3439239-3439344 Caenorhabditis elegans
Exon6959   462   I: 3444148-3444609 Caenorhabditis elegans
Exon6960   94   I: 3445100-3445193 Caenorhabditis elegans
Exon6961   635   I: 3445242-3445876 Caenorhabditis elegans
Exon6962   165   I: 3446925-3447089 Caenorhabditis elegans
Exon6963   64   I: 3447631-3447694 Caenorhabditis elegans
Exon6964   222   I: 3447746-3447967 Caenorhabditis elegans
Exon6965   298   I: 3448878-3449175 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.28.1 3439099 3449175 1

1 Sequence

Length
2127

1 Sequence Ontology Term

Identifier Name Description
transcript