WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.12.1 Sequence Name  Y47G6A.12.1
Length (nt)  3941   Chromosome Location  I: 3433158-3438543
Chromosome . Primary Identifier  I Chromosome Location . Start  3433158
Chromosome Location . End  3438543 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004775 sep-1 Y47G6A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.12 Y47G6A.12 3789   I: 3433300-3433963

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.12.1 3433158 3438543 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6940   806   I: 3433158-3433963 Caenorhabditis elegans
Exon6941   96   I: 3434016-3434111 Caenorhabditis elegans
Exon6942   179   I: 3434162-3434340 Caenorhabditis elegans
Exon6943   895   I: 3434695-3435589 Caenorhabditis elegans
Exon6944   302   I: 3435640-3435941 Caenorhabditis elegans
Exon6945   123   I: 3435993-3436115 Caenorhabditis elegans
Exon6946   226   I: 3436165-3436390 Caenorhabditis elegans
Exon6947   400   I: 3437123-3437522 Caenorhabditis elegans
Exon6948   160   I: 3437580-3437739 Caenorhabditis elegans
Exon6949   754   I: 3437790-3438543 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47G6A.12.1 3433158 3438543 -1

1 Sequence

Length
3941

1 Sequence Ontology Term

Identifier Name Description
transcript