WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44E3A.6c.1 Sequence Name  Y44E3A.6c.1
Length (nt)  2869   Chromosome Location  I: 3340228-3349897
Chromosome . Primary Identifier  I Chromosome Location . Start  3340228
Chromosome Location . End  3349897 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44E3A.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021551 edc-4 Y44E3A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44E3A.6c Y44E3A.6c 2532   I: 3340559-3340599

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.6c.1 3340228 3349897 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6470   372   I: 3340228-3340599 Caenorhabditis elegans
Exon6474   108   I: 3340648-3340755 Caenorhabditis elegans
Exon6479   409   I: 3342218-3342626 Caenorhabditis elegans
Exon6484   296   I: 3343334-3343629 Caenorhabditis elegans
Exon6489   438   I: 3344573-3345010 Caenorhabditis elegans
Exon6494   133   I: 3345438-3345570 Caenorhabditis elegans
Exon6499   528   I: 3346488-3347015 Caenorhabditis elegans
Exon6504   139   I: 3348133-3348271 Caenorhabditis elegans
Exon6509   113   I: 3348334-3348446 Caenorhabditis elegans
Exon6514   129   I: 3348492-3348620 Caenorhabditis elegans
Exon6519   148   I: 3349617-3349764 Caenorhabditis elegans
Exon6522   56   I: 3349842-3349897 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.6c.1 3340228 3349897 -1

1 Sequence

Length
2869

1 Sequence Ontology Term

Identifier Name Description
transcript