WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44E3A.6a.1 Sequence Name  Y44E3A.6a.1
Length (nt)  2889   Chromosome Location  I: 3340212-3349907
Chromosome . Primary Identifier  I Chromosome Location . Start  3340212
Chromosome Location . End  3349907 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44E3A.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021551 edc-4 Y44E3A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44E3A.6a Y44E3A.6a 2526   I: 3340559-3340599

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.6a.1 3340212 3349907 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6467   388   I: 3340212-3340599 Caenorhabditis elegans
Exon6471   108   I: 3340648-3340755 Caenorhabditis elegans
Exon6476   409   I: 3342218-3342626 Caenorhabditis elegans
Exon6481   290   I: 3343334-3343623 Caenorhabditis elegans
Exon6486   438   I: 3344573-3345010 Caenorhabditis elegans
Exon6491   133   I: 3345438-3345570 Caenorhabditis elegans
Exon6496   528   I: 3346488-3347015 Caenorhabditis elegans
Exon6501   139   I: 3348133-3348271 Caenorhabditis elegans
Exon6506   113   I: 3348334-3348446 Caenorhabditis elegans
Exon6511   129   I: 3348492-3348620 Caenorhabditis elegans
Exon6516   148   I: 3349617-3349764 Caenorhabditis elegans
Exon6524   66   I: 3349842-3349907 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.6a.1 3340212 3349907 -1

1 Sequence

Length
2889

1 Sequence Ontology Term

Identifier Name Description
transcript