WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10A.2.1 Sequence Name  Y54E10A.2.1
Length (nt)  2946   Chromosome Location  I: 3233391-3256077
Chromosome . Primary Identifier  I Chromosome Location . Start  3233391
Chromosome Location . End  3256077 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003258 cogc-1 Y54E10A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.2 Y54E10A.2 2364   I: 3233391-3233458

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.2.1 3233391 3256077 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6258   68   I: 3233391-3233458 Caenorhabditis elegans
Exon6259   165   I: 3234369-3234533 Caenorhabditis elegans
Exon6260   80   I: 3235248-3235327 Caenorhabditis elegans
Exon6261   86   I: 3235508-3235593 Caenorhabditis elegans
Exon6262   340   I: 3237005-3237344 Caenorhabditis elegans
Exon6263   166   I: 3238191-3238356 Caenorhabditis elegans
Exon6264   181   I: 3239117-3239297 Caenorhabditis elegans
Exon6265   152   I: 3240077-3240228 Caenorhabditis elegans
Exon6266   327   I: 3242158-3242484 Caenorhabditis elegans
Exon6277   103   I: 3253010-3253112 Caenorhabditis elegans
Exon6278   296   I: 3253165-3253460 Caenorhabditis elegans
Exon6280   109   I: 3253863-3253971 Caenorhabditis elegans
Exon6281   141   I: 3254189-3254329 Caenorhabditis elegans
Exon6282   70   I: 3254378-3254447 Caenorhabditis elegans
Exon6283   662   I: 3255416-3256077 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.2.1 3233391 3256077 1

1 Sequence

Length
2946

1 Sequence Ontology Term

Identifier Name Description
transcript