WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10A.14a.1 Sequence Name  Y54E10A.14a.1
Length (nt)  1107   Chromosome Location  I: 3217296-3222955
Chromosome . Primary Identifier  I Chromosome Location . Start  3217296
Chromosome Location . End  3222955 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.14a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004404 rom-5 Y54E10A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.14a Y54E10A.14a 978   I: 3217420-3217561

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E10A.14a.1 3217296 3222955 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6237   266   I: 3217296-3217561 Caenorhabditis elegans
Exon6238   97   I: 3218011-3218107 Caenorhabditis elegans
Exon6240   206   I: 3218787-3218992 Caenorhabditis elegans
Exon6242   143   I: 3220025-3220167 Caenorhabditis elegans
Exon6244   75   I: 3220731-3220805 Caenorhabditis elegans
Exon6246   114   I: 3220941-3221054 Caenorhabditis elegans
Exon6248   206   I: 3222750-3222955 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E10A.14a.1 3217296 3222955 -1

1 Sequence

Length
1107

1 Sequence Ontology Term

Identifier Name Description
transcript