WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10A.4a.2 Sequence Name  Y54E10A.4a.2
Length (nt)  1592   Chromosome Location  I: 3212990-3217267
Chromosome . Primary Identifier  I Chromosome Location . Start  3212990
Chromosome Location . End  3217267 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001481 fog-1 Y54E10A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.4a Y54E10A.4a 1218   I: 3213118-3213202

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E10A.4a.2 3212990 3217267 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6218   213   I: 3212990-3213202 Caenorhabditis elegans
Exon6220   146   I: 3213799-3213944 Caenorhabditis elegans
Exon6224   303   I: 3214009-3214311 Caenorhabditis elegans
Exon6228   450   I: 3215313-3215762 Caenorhabditis elegans
Exon6233   480   I: 3216788-3217267 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E10A.4a.2 3212990 3217267 1

1 Sequence

Length
1592

1 Sequence Ontology Term

Identifier Name Description
transcript