WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10A.4a.1 Sequence Name  Y54E10A.4a.1
Length (nt)  2217   Chromosome Location  I: 3211046-3217366
Chromosome . Primary Identifier  I Chromosome Location . Start  3211046
Chromosome Location . End  3217366 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001481 fog-1 Y54E10A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.4a Y54E10A.4a 1218   I: 3213118-3213202

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E10A.4a.1 3211046 3217366 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6208   74   I: 3211046-3211119 Caenorhabditis elegans
Exon6210   103   I: 3211172-3211274 Caenorhabditis elegans
Exon6212   101   I: 3211331-3211431 Caenorhabditis elegans
Exon6214   248   I: 3211486-3211733 Caenorhabditis elegans
Exon6216   213   I: 3212990-3213202 Caenorhabditis elegans
Exon6219   146   I: 3213799-3213944 Caenorhabditis elegans
Exon6223   303   I: 3214009-3214311 Caenorhabditis elegans
Exon6227   450   I: 3215313-3215762 Caenorhabditis elegans
Exon6234   579   I: 3216788-3217366 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E10A.4a.1 3211046 3217366 1

1 Sequence

Length
2217

1 Sequence Ontology Term

Identifier Name Description
transcript