WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10A.11.1 Sequence Name  Y54E10A.11.1
Length (nt)  4595   Chromosome Location  I: 3176419-3192857
Chromosome . Primary Identifier  I Chromosome Location . Start  3176419
Chromosome Location . End  3192857 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021831 Y54E10A.11 Y54E10A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.11 Y54E10A.11 4341   I: 3176512-3176574

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.11.1 3176419 3192857 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6149   156   I: 3176419-3176574 Caenorhabditis elegans
Exon6150   614   I: 3178203-3178816 Caenorhabditis elegans
Exon6152   262   I: 3179674-3179935 Caenorhabditis elegans
Exon6154   70   I: 3179992-3180061 Caenorhabditis elegans
Exon6156   443   I: 3180885-3181327 Caenorhabditis elegans
Exon6158   133   I: 3183062-3183194 Caenorhabditis elegans
Exon6160   87   I: 3183244-3183330 Caenorhabditis elegans
Exon6162   280   I: 3184316-3184595 Caenorhabditis elegans
Exon6164   148   I: 3185597-3185744 Caenorhabditis elegans
Exon6166   978   I: 3185792-3186769 Caenorhabditis elegans
Exon6168   578   I: 3187892-3188469 Caenorhabditis elegans
Exon6170   562   I: 3190209-3190770 Caenorhabditis elegans
Exon6172   87   I: 3192525-3192611 Caenorhabditis elegans
Exon6175   197   I: 3192661-3192857 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.11.1 3176419 3192857 -1

1 Sequence

Length
4595

1 Sequence Ontology Term

Identifier Name Description
transcript