WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10A.9c.1 Sequence Name  Y54E10A.9c.1
Length (nt)  3465   Chromosome Location  I: 3158492-3162391
Chromosome . Primary Identifier  I Chromosome Location . Start  3158492
Chromosome Location . End  3162391 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006888 vbh-1 Y54E10A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.9c Y54E10A.9c 1983   I: 3159764-3159867

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E10A.9c.1 3158492 3162391 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6102   1376   I: 3158492-3159867 Caenorhabditis elegans
Exon6107   185   I: 3159923-3160107 Caenorhabditis elegans
Exon6111   1061   I: 3160155-3161215 Caenorhabditis elegans
Exon6115   313   I: 3161284-3161596 Caenorhabditis elegans
Exon6118   51   I: 3161643-3161693 Caenorhabditis elegans
Exon6123   51   I: 3161739-3161789 Caenorhabditis elegans
Exon6125   252   I: 3161918-3162169 Caenorhabditis elegans
Exon6131   176   I: 3162216-3162391 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E10A.9c.1 3158492 3162391 -1

1 Sequence

Length
3465

1 Sequence Ontology Term

Identifier Name Description
transcript