WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45E1.1a.2 Sequence Name  C45E1.1a.2
Length (nt)  1359   Chromosome Location  I: 3101851-3109621
Chromosome . Primary Identifier  I Chromosome Location . Start  3101851
Chromosome Location . End  3109621 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45E1.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003654 nhr-64 C45E1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45E1.1a C45E1.1a 1110   I: 3104368-3104512

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C45E1.1a.2 3101851 3109621 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6021   145   I: 3101851-3101995 Caenorhabditis elegans
Exon6025   150   I: 3104363-3104512 Caenorhabditis elegans
Exon6031   75   I: 3106158-3106232 Caenorhabditis elegans
Exon6034   196   I: 3107518-3107713 Caenorhabditis elegans
Exon6038   159   I: 3107855-3108013 Caenorhabditis elegans
Exon6042   123   I: 3108202-3108324 Caenorhabditis elegans
Exon6046   107   I: 3108509-3108615 Caenorhabditis elegans
Exon6050   56   I: 3108668-3108723 Caenorhabditis elegans
Exon6056   348   I: 3109274-3109621 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C45E1.1a.2 3101851 3109621 1

1 Sequence

Length
1359

1 Sequence Ontology Term

Identifier Name Description
transcript