WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10BR.7.1 Sequence Name  Y54E10BR.7.1
Length (nt)  2538   Chromosome Location  I: 3034716-3047794
Chromosome . Primary Identifier  I Chromosome Location . Start  3034716
Chromosome Location . End  3047794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10BR.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003387 mod-5 Y54E10BR.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10BR.7 Y54E10BR.7 2016   I: 3035238-3035446

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10BR.7.1 3034716 3047794 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5902   731   I: 3034716-3035446 Caenorhabditis elegans
Exon5903   88   I: 3038593-3038680 Caenorhabditis elegans
Exon5904   198   I: 3038735-3038932 Caenorhabditis elegans
Exon5905   258   I: 3039458-3039715 Caenorhabditis elegans
Exon5906   112   I: 3041190-3041301 Caenorhabditis elegans
Exon5907   378   I: 3041776-3042153 Caenorhabditis elegans
Exon5908   134   I: 3042397-3042530 Caenorhabditis elegans
Exon5909   98   I: 3042640-3042737 Caenorhabditis elegans
Exon5910   167   I: 3043023-3043189 Caenorhabditis elegans
Exon5911   247   I: 3043413-3043659 Caenorhabditis elegans
Exon5912   78   I: 3044672-3044749 Caenorhabditis elegans
Exon5913   49   I: 3047746-3047794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10BR.7.1 3034716 3047794 -1

1 Sequence

Length
2538

1 Sequence Ontology Term

Identifier Name Description
transcript