WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71F9AM.4a.1 Sequence Name  Y71F9AM.4a.1
Length (nt)  2552   Chromosome Location  I: 2931461-2947104
Chromosome . Primary Identifier  I Chromosome Location . Start  2931461
Chromosome Location . End  2947104 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AM.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022121 cogc-3 Y71F9AM.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AM.4a Y71F9AM.4a 2385   I: 2931461-2931548

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AM.4a.1 2931461 2947104 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5777   88   I: 2931461-2931548 Caenorhabditis elegans
Exon5778   167   I: 2931616-2931782 Caenorhabditis elegans
Exon5779   165   I: 2932809-2932973 Caenorhabditis elegans
Exon5780   234   I: 2933903-2934136 Caenorhabditis elegans
Exon5782   92   I: 2935625-2935716 Caenorhabditis elegans
Exon5784   144   I: 2935987-2936130 Caenorhabditis elegans
Exon5786   322   I: 2936560-2936881 Caenorhabditis elegans
Exon5788   161   I: 2937758-2937918 Caenorhabditis elegans
Exon5790   235   I: 2938442-2938676 Caenorhabditis elegans
Exon5797   197   I: 2942824-2943020 Caenorhabditis elegans
Exon5799   133   I: 2943071-2943203 Caenorhabditis elegans
Exon5801   147   I: 2944076-2944222 Caenorhabditis elegans
Exon5803   108   I: 2944274-2944381 Caenorhabditis elegans
Exon5806   359   I: 2946746-2947104 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AM.4a.1 2931461 2947104 1

1 Sequence

Length
2552

1 Sequence Ontology Term

Identifier Name Description
transcript