WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03D8.6a.1 Sequence Name  W03D8.6a.1
Length (nt)  5113   Chromosome Location  I: 2802822-2815818
Chromosome . Primary Identifier  I Chromosome Location . Start  2802822
Chromosome Location . End  2815818 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03D8.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002174 itx-1 W03D8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03D8.6a W03D8.6a 4938   I: 2802822-2802960

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03D8.6a.1 2802822 2815818 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5358   139   I: 2802822-2802960 Caenorhabditis elegans
Exon5359   107   I: 2803997-2804103 Caenorhabditis elegans
Exon5362   97   I: 2804151-2804247 Caenorhabditis elegans
Exon5365   293   I: 2804938-2805230 Caenorhabditis elegans
Exon5370   76   I: 2805324-2805399 Caenorhabditis elegans
Exon5375   268   I: 2805455-2805722 Caenorhabditis elegans
Exon5380   232   I: 2805800-2806031 Caenorhabditis elegans
Exon5385   178   I: 2806794-2806971 Caenorhabditis elegans
Exon5390   141   I: 2807018-2807158 Caenorhabditis elegans
Exon5395   124   I: 2807207-2807330 Caenorhabditis elegans
Exon5400   97   I: 2807619-2807715 Caenorhabditis elegans
Exon5405   199   I: 2808246-2808444 Caenorhabditis elegans
Exon5410   150   I: 2808660-2808809 Caenorhabditis elegans
Exon5415   44   I: 2808867-2808910 Caenorhabditis elegans
Exon5420   179   I: 2808963-2809141 Caenorhabditis elegans
Exon5425   144   I: 2809188-2809331 Caenorhabditis elegans
Exon5430   86   I: 2810159-2810244 Caenorhabditis elegans
Exon5435   299   I: 2810289-2810587 Caenorhabditis elegans
Exon5440   186   I: 2810974-2811159 Caenorhabditis elegans
Exon5449   382   I: 2811241-2811622 Caenorhabditis elegans
Exon5454   343   I: 2811674-2812016 Caenorhabditis elegans
Exon5459   160   I: 2812121-2812280 Caenorhabditis elegans
Exon5464   154   I: 2812785-2812938 Caenorhabditis elegans
Exon5469   279   I: 2813000-2813278 Caenorhabditis elegans
Exon5474   96   I: 2813394-2813489 Caenorhabditis elegans
Exon5479   84   I: 2813547-2813630 Caenorhabditis elegans
Exon5484   62   I: 2813686-2813747 Caenorhabditis elegans
Exon5491   161   I: 2814200-2814360 Caenorhabditis elegans
Exon5496   353   I: 2815466-2815818 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03D8.6a.1 2802822 2815818 1

1 Sequence

Length
5113

1 Sequence Ontology Term

Identifier Name Description
transcript