WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03D8.6c.1 Sequence Name  W03D8.6c.1
Length (nt)  5135   Chromosome Location  I: 2802803-2815830
Chromosome . Primary Identifier  I Chromosome Location . Start  2802803
Chromosome Location . End  2815830 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03D8.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002174 itx-1 W03D8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03D8.6c W03D8.6c 4929   I: 2802822-2802960

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W03D8.6c.1 2802803 2815830 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5357   158   I: 2802803-2802960 Caenorhabditis elegans
Exon5361   107   I: 2803997-2804103 Caenorhabditis elegans
Exon5364   97   I: 2804151-2804247 Caenorhabditis elegans
Exon5367   293   I: 2804938-2805230 Caenorhabditis elegans
Exon5372   76   I: 2805324-2805399 Caenorhabditis elegans
Exon5377   268   I: 2805455-2805722 Caenorhabditis elegans
Exon5382   232   I: 2805800-2806031 Caenorhabditis elegans
Exon5387   178   I: 2806794-2806971 Caenorhabditis elegans
Exon5392   141   I: 2807018-2807158 Caenorhabditis elegans
Exon5397   124   I: 2807207-2807330 Caenorhabditis elegans
Exon5402   97   I: 2807619-2807715 Caenorhabditis elegans
Exon5407   199   I: 2808246-2808444 Caenorhabditis elegans
Exon5412   150   I: 2808660-2808809 Caenorhabditis elegans
Exon5417   44   I: 2808867-2808910 Caenorhabditis elegans
Exon5422   179   I: 2808963-2809141 Caenorhabditis elegans
Exon5427   144   I: 2809188-2809331 Caenorhabditis elegans
Exon5432   86   I: 2810159-2810244 Caenorhabditis elegans
Exon5437   299   I: 2810289-2810587 Caenorhabditis elegans
Exon5442   186   I: 2810974-2811159 Caenorhabditis elegans
Exon5446   154   I: 2811241-2811394 Caenorhabditis elegans
Exon5451   153   I: 2811470-2811622 Caenorhabditis elegans
Exon5456   343   I: 2811674-2812016 Caenorhabditis elegans
Exon5461   160   I: 2812121-2812280 Caenorhabditis elegans
Exon5466   154   I: 2812785-2812938 Caenorhabditis elegans
Exon5471   279   I: 2813000-2813278 Caenorhabditis elegans
Exon5476   96   I: 2813394-2813489 Caenorhabditis elegans
Exon5481   84   I: 2813547-2813630 Caenorhabditis elegans
Exon5486   62   I: 2813686-2813747 Caenorhabditis elegans
Exon5489   227   I: 2814134-2814360 Caenorhabditis elegans
Exon5498   365   I: 2815466-2815830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W03D8.6c.1 2802803 2815830 1

1 Sequence

Length
5135

1 Sequence Ontology Term

Identifier Name Description
transcript