WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71F9B.10e.1 Sequence Name  Y71F9B.10e.1
Length (nt)  3498   Chromosome Location  I: 2761318-2771140
Chromosome . Primary Identifier  I Chromosome Location . Start  2761318
Chromosome Location . End  2771140 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9B.10e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004946 sop-3 Y71F9B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.10e Y71F9B.10e 3498   I: 2761318-2761513

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y71F9B.10e.1 2761318 2771140 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5210   196   I: 2761318-2761513 Caenorhabditis elegans
Exon5216   246   I: 2762147-2762392 Caenorhabditis elegans
Exon5222   957   I: 2763442-2764398 Caenorhabditis elegans
Exon5229   604   I: 2765092-2765695 Caenorhabditis elegans
Exon5236   159   I: 2765738-2765896 Caenorhabditis elegans
Exon5242   660   I: 2767170-2767829 Caenorhabditis elegans
Exon5248   224   I: 2768648-2768871 Caenorhabditis elegans
Exon5254   112   I: 2769761-2769872 Caenorhabditis elegans
Exon5257   340   I: 2770801-2771140 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y71F9B.10e.1 2761318 2771140 -1

1 Sequence

Length
3498

1 Sequence Ontology Term

Identifier Name Description
transcript