WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71F9B.5a.1 Sequence Name  Y71F9B.5a.1
Length (nt)  1894   Chromosome Location  I: 2707599-2717542
Chromosome . Primary Identifier  I Chromosome Location . Start  2707599
Chromosome Location . End  2717542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9B.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003006 lin-17 Y71F9B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.5a Y71F9B.5a 1677   I: 2707629-2707694

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y71F9B.5a.1 2707599 2717542 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5077   96   I: 2707599-2707694 Caenorhabditis elegans
Exon5078   105   I: 2708102-2708206 Caenorhabditis elegans
Exon5082   147   I: 2709920-2710066 Caenorhabditis elegans
Exon5086   285   I: 2711121-2711405 Caenorhabditis elegans
Exon5091   110   I: 2712439-2712548 Caenorhabditis elegans
Exon5096   222   I: 2713851-2714072 Caenorhabditis elegans
Exon5101   289   I: 2714120-2714408 Caenorhabditis elegans
Exon5106   327   I: 2714728-2715054 Caenorhabditis elegans
Exon5113   313   I: 2717230-2717542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y71F9B.5a.1 2707599 2717542 1

1 Sequence

Length
1894

1 Sequence Ontology Term

Identifier Name Description
transcript