WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71F9B.5a.2 Sequence Name  Y71F9B.5a.2
Length (nt)  2198   Chromosome Location  I: 2706883-2717549
Chromosome . Primary Identifier  I Chromosome Location . Start  2706883
Chromosome Location . End  2717549 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9B.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003006 lin-17 Y71F9B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.5a Y71F9B.5a 1677   I: 2707629-2707694

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y71F9B.5a.2 2706883 2717549 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5074   297   I: 2706883-2707179 Caenorhabditis elegans
Exon5076   96   I: 2707599-2707694 Caenorhabditis elegans
Exon5079   105   I: 2708102-2708206 Caenorhabditis elegans
Exon5083   147   I: 2709920-2710066 Caenorhabditis elegans
Exon5087   285   I: 2711121-2711405 Caenorhabditis elegans
Exon5092   110   I: 2712439-2712548 Caenorhabditis elegans
Exon5097   222   I: 2713851-2714072 Caenorhabditis elegans
Exon5102   289   I: 2714120-2714408 Caenorhabditis elegans
Exon5107   327   I: 2714728-2715054 Caenorhabditis elegans
Exon5114   320   I: 2717230-2717549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y71F9B.5a.2 2706883 2717549 1

1 Sequence

Length
2198

1 Sequence Ontology Term

Identifier Name Description
transcript