WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y23H5A.5d.1 Sequence Name  Y23H5A.5d.1
Length (nt)  2725   Chromosome Location  I: 2606752-2617353
Chromosome . Primary Identifier  I Chromosome Location . Start  2606752
Chromosome Location . End  2617353 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y23H5A.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000832 ctn-1 Y23H5A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y23H5A.5d Y23H5A.5d 2355   I: 2606783-2606932

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5A.5d.1 2606752 2617353 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4723   181   I: 2606752-2606932 Caenorhabditis elegans
Exon4730   84   I: 2607212-2607295 Caenorhabditis elegans
Exon4736   121   I: 2608188-2608308 Caenorhabditis elegans
Exon4742   167   I: 2608861-2609027 Caenorhabditis elegans
Exon4748   420   I: 2609889-2610308 Caenorhabditis elegans
Exon4754   438   I: 2611371-2611808 Caenorhabditis elegans
Exon4760   93   I: 2611863-2611955 Caenorhabditis elegans
Exon4766   93   I: 2612003-2612095 Caenorhabditis elegans
Exon4771   99   I: 2612788-2612886 Caenorhabditis elegans
Exon4777   51   I: 2613334-2613384 Caenorhabditis elegans
Exon4782   471   I: 2614019-2614489 Caenorhabditis elegans
Exon4790   78   I: 2615077-2615154 Caenorhabditis elegans
Exon4795   90   I: 2615848-2615937 Caenorhabditis elegans
Exon4799   76   I: 2616003-2616078 Caenorhabditis elegans
Exon4801   263   I: 2617091-2617353 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5A.5d.1 2606752 2617353 1

1 Sequence

Length
2725

1 Sequence Ontology Term

Identifier Name Description
transcript