WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y23H5A.5a.1 Sequence Name  Y23H5A.5a.1
Length (nt)  2690   Chromosome Location  I: 2606741-2617360
Chromosome . Primary Identifier  I Chromosome Location . Start  2606741
Chromosome Location . End  2617360 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y23H5A.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000832 ctn-1 Y23H5A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y23H5A.5a Y23H5A.5a 2439   I: 2606741-2606932

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5A.5a.1 2606741 2617360 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4722   192   I: 2606741-2606932 Caenorhabditis elegans
Exon4728   84   I: 2607212-2607295 Caenorhabditis elegans
Exon4734   121   I: 2608188-2608308 Caenorhabditis elegans
Exon4740   167   I: 2608861-2609027 Caenorhabditis elegans
Exon4746   420   I: 2609889-2610308 Caenorhabditis elegans
Exon4752   438   I: 2611371-2611808 Caenorhabditis elegans
Exon4758   93   I: 2611863-2611955 Caenorhabditis elegans
Exon4764   93   I: 2612003-2612095 Caenorhabditis elegans
Exon4770   99   I: 2612788-2612886 Caenorhabditis elegans
Exon4776   51   I: 2613334-2613384 Caenorhabditis elegans
Exon4781   471   I: 2614019-2614489 Caenorhabditis elegans
Exon4787   23   I: 2614797-2614819 Caenorhabditis elegans
Exon4789   78   I: 2615077-2615154 Caenorhabditis elegans
Exon4794   90   I: 2615848-2615937 Caenorhabditis elegans
Exon4803   270   I: 2617091-2617360 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5A.5a.1 2606741 2617360 1

1 Sequence

Length
2690

1 Sequence Ontology Term

Identifier Name Description
transcript