WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55C2.5a.1 Sequence Name  C55C2.5a.1
Length (nt)  1876   Chromosome Location  I: 2571740-2576020
Chromosome . Primary Identifier  I Chromosome Location . Start  2571740
Chromosome Location . End  2576020 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55C2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000006 aat-5 C55C2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55C2.5a C55C2.5a 1614   I: 2571988-2572039

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C55C2.5a.1 2571740 2576020 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4629   300   I: 2571740-2572039 Caenorhabditis elegans
Exon4634   208   I: 2572093-2572300 Caenorhabditis elegans
Exon4637   164   I: 2572356-2572519 Caenorhabditis elegans
Exon4641   167   I: 2572570-2572736 Caenorhabditis elegans
Exon4646   201   I: 2573741-2573941 Caenorhabditis elegans
Exon4649   269   I: 2573999-2574267 Caenorhabditis elegans
Exon4652   132   I: 2574313-2574444 Caenorhabditis elegans
Exon4656   64   I: 2574521-2574584 Caenorhabditis elegans
Exon4660   191   I: 2575439-2575629 Caenorhabditis elegans
Exon4667   180   I: 2575841-2576020 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C55C2.5a.1 2571740 2576020 -1

1 Sequence

Length
1876

1 Sequence Ontology Term

Identifier Name Description
transcript