WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.18a.1 Sequence Name  Y39G10AR.18a.1
Length (nt)  3343   Chromosome Location  I: 2382953-2401492
Chromosome . Primary Identifier  I Chromosome Location . Start  2382953
Chromosome Location . End  2401492 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.18a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021474 dot-1.1 Y39G10AR.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.18a Y39G10AR.18a 2841   I: 2384591-2384991

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.18a.1 2382953 2401492 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4383   492   I: 2382953-2383444 Caenorhabditis elegans
Exon4385   407   I: 2384585-2384991 Caenorhabditis elegans
Exon4388   622   I: 2388157-2388778 Caenorhabditis elegans
Exon4393   77   I: 2389883-2389959 Caenorhabditis elegans
Exon4396   277   I: 2390884-2391160 Caenorhabditis elegans
Exon4399   237   I: 2392472-2392708 Caenorhabditis elegans
Exon4404   147   I: 2396104-2396250 Caenorhabditis elegans
Exon4405   107   I: 2396306-2396412 Caenorhabditis elegans
Exon4406   44   I: 2397636-2397679 Caenorhabditis elegans
Exon4407   207   I: 2397729-2397935 Caenorhabditis elegans
Exon4408   209   I: 2399182-2399390 Caenorhabditis elegans
Exon4409   153   I: 2400616-2400768 Caenorhabditis elegans
Exon4410   130   I: 2401009-2401138 Caenorhabditis elegans
Exon4411   199   I: 2401210-2401408 Caenorhabditis elegans
Exon4412   35   I: 2401458-2401492 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.18a.1 2382953 2401492 -1

1 Sequence

Length
3343

1 Sequence Ontology Term

Identifier Name Description
transcript