WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03F11.6c.1 Sequence Name  W03F11.6c.1
Length (nt)  5308   Chromosome Location  I: 2160042-2209629
Chromosome . Primary Identifier  I Chromosome Location . Start  2160042
Chromosome Location . End  2209629 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03F11.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021009 afd-1 W03F11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03F11.6c W03F11.6c 4983   I: 2160071-2160199

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W03F11.6c.1 2160042 2209629 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3728   158   I: 2160042-2160199 Caenorhabditis elegans
Exon3731   273   I: 2163018-2163290 Caenorhabditis elegans
Exon3735   85   I: 2164019-2164103 Caenorhabditis elegans
Exon3738   165   I: 2164821-2164985 Caenorhabditis elegans
Exon3743   155   I: 2165976-2166130 Caenorhabditis elegans
Exon3748   167   I: 2172004-2172170 Caenorhabditis elegans
Exon3756   113   I: 2173754-2173866 Caenorhabditis elegans
Exon3765   98   I: 2173925-2174022 Caenorhabditis elegans
Exon3774   96   I: 2174889-2174984 Caenorhabditis elegans
Exon3783   180   I: 2185739-2185918 Caenorhabditis elegans
Exon3794   83   I: 2186631-2186713 Caenorhabditis elegans
Exon3806   62   I: 2192844-2192905 Caenorhabditis elegans
Exon3820   1268   I: 2195399-2196666 Caenorhabditis elegans
Exon3834   96   I: 2197189-2197284 Caenorhabditis elegans
Exon3850   140   I: 2200010-2200149 Caenorhabditis elegans
Exon3865   439   I: 2201730-2202168 Caenorhabditis elegans
Exon3880   291   I: 2203574-2203864 Caenorhabditis elegans
Exon3895   384   I: 2204925-2205308 Caenorhabditis elegans
Exon3910   519   I: 2207320-2207838 Caenorhabditis elegans
Exon3932   536   I: 2209094-2209629 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W03F11.6c.1 2160042 2209629 1

1 Sequence

Length
5308

1 Sequence Ontology Term

Identifier Name Description
transcript