WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y20F4.3a.1 Sequence Name  Y20F4.3a.1
Length (nt)  3310   Chromosome Location  I: 1988246-2010525
Chromosome . Primary Identifier  I Chromosome Location . Start  1988246
Chromosome Location . End  2010525 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y20F4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021238 gap-3 Y20F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y20F4.3a Y20F4.3a 2787   I: 1988723-1988896

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y20F4.3a.1 1988246 2010525 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3421   651   I: 1988246-1988896 Caenorhabditis elegans
Exon3423   526   I: 1990030-1990555 Caenorhabditis elegans
Exon3425   126   I: 1991668-1991793 Caenorhabditis elegans
Exon3427   228   I: 1993294-1993521 Caenorhabditis elegans
Exon3429   261   I: 1995985-1996245 Caenorhabditis elegans
Exon3431   182   I: 1997744-1997925 Caenorhabditis elegans
Exon3436   89   I: 1999953-2000041 Caenorhabditis elegans
Exon3438   91   I: 2000125-2000215 Caenorhabditis elegans
Exon3441   129   I: 2001065-2001193 Caenorhabditis elegans
Exon3442   175   I: 2006130-2006304 Caenorhabditis elegans
Exon3444   245   I: 2007322-2007566 Caenorhabditis elegans
Exon3445   183   I: 2008588-2008770 Caenorhabditis elegans
Exon3446   130   I: 2009830-2009959 Caenorhabditis elegans
Exon3447   95   I: 2010004-2010098 Caenorhabditis elegans
Exon3448   93   I: 2010165-2010257 Caenorhabditis elegans
Exon3449   106   I: 2010420-2010525 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y20F4.3a.1 1988246 2010525 -1

1 Sequence

Length
3310

1 Sequence Ontology Term

Identifier Name Description
transcript