WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12A.2c.2 Sequence Name  Y71G12A.2c.2
Length (nt)  2829   Chromosome Location  I: 1899021-1923089
Chromosome . Primary Identifier  I Chromosome Location . Start  1899021
Chromosome Location . End  1923089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12A.2c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022138 trpp-10 Y71G12A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12A.2c Y71G12A.2c 840   I: 1917049-1917128

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y71G12A.2c.2 1899021 1923089 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3288   406   I: 1899021-1899426 Caenorhabditis elegans
Exon3297   389   I: 1902510-1902898 Caenorhabditis elegans
Exon3301   258   I: 1904345-1904602 Caenorhabditis elegans
Exon3304   223   I: 1906018-1906240 Caenorhabditis elegans
Exon3308   307   I: 1908199-1908505 Caenorhabditis elegans
Exon3312   254   I: 1910215-1910468 Caenorhabditis elegans
Exon3320   95   I: 1917034-1917128 Caenorhabditis elegans
Exon3324   482   I: 1917750-1918231 Caenorhabditis elegans
Exon3329   110   I: 1919230-1919339 Caenorhabditis elegans
Exon3332   305   I: 1922785-1923089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y71G12A.2c.2 1899021 1923089 1

1 Sequence

Length
2829

1 Sequence Ontology Term

Identifier Name Description
transcript