WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12A.2b.1 Sequence Name  Y71G12A.2b.1
Length (nt)  3686   Chromosome Location  I: 1895176-1923240
Chromosome . Primary Identifier  I Chromosome Location . Start  1895176
Chromosome Location . End  1923240 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022138 trpp-10 Y71G12A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12A.2b Y71G12A.2b 3339   I: 1895235-1895304

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12A.2b.1 1895176 1923240 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3278   129   I: 1895176-1895304 Caenorhabditis elegans
Exon3281   82   I: 1895356-1895437 Caenorhabditis elegans
Exon3283   199   I: 1895498-1895696 Caenorhabditis elegans
Exon3286   303   I: 1896475-1896777 Caenorhabditis elegans
Exon3291   399   I: 1899028-1899426 Caenorhabditis elegans
Exon3295   389   I: 1902510-1902898 Caenorhabditis elegans
Exon3299   258   I: 1904345-1904602 Caenorhabditis elegans
Exon3302   223   I: 1906018-1906240 Caenorhabditis elegans
Exon3306   307   I: 1908199-1908505 Caenorhabditis elegans
Exon3310   254   I: 1910215-1910468 Caenorhabditis elegans
Exon3318   95   I: 1917034-1917128 Caenorhabditis elegans
Exon3322   482   I: 1917750-1918231 Caenorhabditis elegans
Exon3327   110   I: 1919230-1919339 Caenorhabditis elegans
Exon3336   456   I: 1922785-1923240 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12A.2b.1 1895176 1923240 1

1 Sequence

Length
3686

1 Sequence Ontology Term

Identifier Name Description
transcript