WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12A.2a.1 Sequence Name  Y71G12A.2a.1
Length (nt)  1327   Chromosome Location  I: 1895161-1900454
Chromosome . Primary Identifier  I Chromosome Location . Start  1895161
Chromosome Location . End  1900454 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022138 trpp-10 Y71G12A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12A.2a Y71G12A.2a 1164   I: 1895235-1895304

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y71G12A.2a.1 1895161 1900454 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3277   144   I: 1895161-1895304 Caenorhabditis elegans
Exon3280   82   I: 1895356-1895437 Caenorhabditis elegans
Exon3282   199   I: 1895498-1895696 Caenorhabditis elegans
Exon3285   303   I: 1896475-1896777 Caenorhabditis elegans
Exon3290   399   I: 1899028-1899426 Caenorhabditis elegans
Exon3293   55   I: 1900018-1900072 Caenorhabditis elegans
Exon3294   145   I: 1900310-1900454 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y71G12A.2a.1 1895161 1900454 1

1 Sequence

Length
1327

1 Sequence Ontology Term

Identifier Name Description
transcript