WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00303070 Gene Name  C53H9.4
Sequence Name  ? C53H9.4 Organism  Caenorhabditis elegans
Automated Description  Is affected by daf-16 based on RNA-seq studies. Biotype  SO:0001217
Genetic Position  I:± Length (nt)  ? 93
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00303070

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53H9.4.1 C53H9.4.1 93   I: 1835780-1835872
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53H9.4 C53H9.4 93   I: 1835780-1835872

1 RNAi Result

WormBase ID
WBRNAi00001732

5 Allele

Public Name
gk963902
gk963630
gk963701
gk465909
gk461696

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00303070 1835780 1835872 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcriptions that showed significantly increased expression in daf-16(RNAi) comparing to empty vector injection into rrf-3(pk1426);daf-2(e1368) animals. Genes with an absolute fold changeof at least 2 and standard p-values below 0.05 were considered as differentially expressed. WBPaper00062193:daf-16(RNAi)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00303070 1835780 1835872 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
93

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region