Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y71G12B.40 | Y71G12B.40 |
119
 |
I: 1696199-1697676 |
Other
50 Allele
| Public Name |
|---|
| gk963902 |
| gk963630 |
| gk963701 |
| WBVar02068057 |
| WBVar01711932 |
| WBVar01711931 |
| WBVar01711933 |
| WBVar01711930 |
| WBVar01411025 |
| WBVar01889532 |
| WBVar01418331 |
| gk373130 |
| gk349641 |
| gk701568 |
| WBVar02095373 |
| WBVar01956034 |
| WBVar01956033 |
| WBVar01956035 |
| WBVar02015935 |
| gk921988 |
| gk824585 |
| WBVar01801180 |
| WBVar01398646 |
| WBVar01573636 |
| WBVar01402593 |
| WBVar01661740 |
| WBVar01418334 |
| WBVar01914414 |
| WBVar02049319 |
| WBVar01277839 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00219767 | 1696199 | 1697676 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrI_1697677..1698348 | 672 | I: 1697677-1698348 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts depleted in purified oocyte P bodies comparing to in whole oocytes. | DESeq2, FDR < 0.05, fold change > 2. | WBPaper00065975:P-body_vs_oocyte_depleted | |
| Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage. | DESeq v1.6.3. Fold change > 1.5. | WBPaper00050370:dpy-21(e428)_L3_upregulated | |
| Transcripts that showed significantly altered expression in rnp-6(dh1127) animals comparing to in N2 when fed with heat killed E. coli OP50. | Differentially expressed genes (DEGs) (q-value <0.05) between different samples were identified using the stringtie version 1.3.0, followed by Cufflinks version 2.2. | WBPaper00059824:rnp-6(dh1127)_regulated_OP50 | |
| Transcripts that showed significantly decreased expression in whole animal day 1 N2 adults comparing to in whole animal day 8 N2 adults. | DESeq2, FDR < 0.05, fold change > 2. | WBPaper00066978:Day1Adult_vs_Day8Adult_downregulated_neuron |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrI_1693676..1696198 | 2523 | I: 1693676-1696198 | Caenorhabditis elegans |
