WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47G6.4a.1 Sequence Name  F47G6.4a.1
Length (nt)  3889   Chromosome Location  I: 1446497-1465358
Chromosome . Primary Identifier  I Chromosome Location . Start  1446497
Chromosome Location . End  1465358 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47G6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004969 spe-15 F47G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47G6.4a F47G6.4a 3660   I: 1446666-1446947

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F47G6.4a.1 1446497 1465358 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2543   73   I: 1446497-1446569 Caenorhabditis elegans
Exon2544   294   I: 1446654-1446947 Caenorhabditis elegans
Exon2547   295   I: 1447263-1447557 Caenorhabditis elegans
Exon2548   98   I: 1447910-1448007 Caenorhabditis elegans
Exon2549   165   I: 1448085-1448249 Caenorhabditis elegans
Exon2550   1016   I: 1449235-1450250 Caenorhabditis elegans
Exon2554   136   I: 1454245-1454380 Caenorhabditis elegans
Exon2555   321   I: 1454430-1454750 Caenorhabditis elegans
Exon2557   112   I: 1454800-1454911 Caenorhabditis elegans
Exon2559   91   I: 1455674-1455764 Caenorhabditis elegans
Exon2561   58   I: 1460229-1460286 Caenorhabditis elegans
Exon2564   185   I: 1460545-1460729 Caenorhabditis elegans
Exon2567   114   I: 1461515-1461628 Caenorhabditis elegans
Exon2570   287   I: 1461673-1461959 Caenorhabditis elegans
Exon2573   132   I: 1463567-1463698 Caenorhabditis elegans
Exon2576   120   I: 1463932-1464051 Caenorhabditis elegans
Exon2579   105   I: 1464367-1464471 Caenorhabditis elegans
Exon2584   287   I: 1465072-1465358 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F47G6.4a.1 1446497 1465358 1

1 Sequence

Length
3889

1 Sequence Ontology Term

Identifier Name Description
transcript