Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y48G8AR.7 | Y48G8AR.7 |
235
 |
I: 1278808-1279042 |
Other
8 Allele
| Public Name |
|---|
| gk963902 |
| gk963630 |
| gk963701 |
| WBVar02124380 |
| gk102741 |
| gk938381 |
| gk786465 |
| WBVar01530289 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00201534 | 1278808 | 1279042 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrI_1279043..1279435 | 393 | I: 1279043-1279435 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology. | DESEQ2, fold change > 2 and FDR < 0.01. | WBPaper00062103:neuron_enriched | |
| Transcripts that showed significantly increased expression after four-day-old young adult worms were placed on NGM plates seeded with OP50 in the presence 5% Agaro-oligosaccharides(AGO) for 24 h, comparing to animals grown in the absence of AGO. | Fold change > 2. | WBPaper00064306:Agaro-oligosaccharides_upregulated | |
| ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_upregulated_normal |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrI_1273034..1278807 | 5774 | I: 1273034-1278807 | Caenorhabditis elegans |
